4. DTP Computational Physiology to do list

4.1. General

Todo

  • any general todo’s go here.
  • make sure the todo’s are turned off in the config?

4.2. Within sections

Todo

  • Colour background of CellML Text
  • Annotate screen shots with svg for same look and feel
  • CellML Text code is not highlighted for all display situations, currently only in environments that are using an adapted version of pygments
  • Tidy up citations and BiBTeX source (possibly use Zotero to manage?)
  • Make horizontal line for footnotes only visible in html output
  • Check external references markup
  • Consider a more suitable theme (may require changes to an existing one to get a good result)
  • Must check over output (and models) from screenshots to make sure that it matches the current release of OpenCOR, especially against running experiments for the first time.

(The original entry is located in /home/docs/checkouts/readthedocs.org/user_builds/dtp-compphys/checkouts/v2016.03/source/opencor-tutorial/source/index.rst, line 73.)

Todo

  • Fill out a description of how to get MAP Client (preferably linking to MAP Client docs) and the required plugins for our tasks.
  • possibly also a summary of the downloads required for the tasks, but they’re probably better off in the actual documentation.

(The original entry is located in /home/docs/checkouts/readthedocs.org/user_builds/dtp-compphys/checkouts/v2016.03/source/software.rst, line 13.)

Todo

Description of how to get Neon - preferably linking to Neon docs, but they probably don’t exist for this instance of the DTP CP module.

(The original entry is located in /home/docs/checkouts/readthedocs.org/user_builds/dtp-compphys/checkouts/v2016.03/source/software.rst, line 26.)

Todo

What other tools should be mentioned?

(The original entry is located in /home/docs/checkouts/readthedocs.org/user_builds/dtp-compphys/checkouts/v2016.03/source/software.rst, line 31.)

Todo

  • any general todo’s go here.
  • make sure the todo’s are turned off in the config?

(The original entry is located in /home/docs/checkouts/readthedocs.org/user_builds/dtp-compphys/checkouts/v2016.03/source/todolist.rst, line 9.)